10.3 Exhaustive Release Notes

Tags:

Below are the exhaustive release notes and known issues. For the general release notes, please see this page. Known Issues Compensation: A BD 25-color data file may not include the compensation matrix when exported from and brought back into FlowJo. Workaround: Export the compensation matrix as an MTX file, and re-apply it to the exported data… Read more »

10.2 Release Notes

Tags:

New Features Note:  This version of FlowJo is compatible with FlowJo Enterprise v2.0 or the newly released FlowJo Enterprise 2.1. Be sure your version of FlowJo Enterprise is new enough before installing this version of FlowJo. New FlowJo Plugin Architecture.   FlowJo can now use plugins that can perform a variety of functions, including the creation… Read more »

FlowJo 10.1r7 Exaustive Release Notes

Tags:

Below are the exhaustive release notes and known issues.  For a digest of these release notes, please see this page. Bugs Fixed Improved the file saving behavior with ACS files Fixed an issue where very large and complex workspaces could take a very long time to close. (A side effect of this is that you… Read more »

10.1r7 Release Notes

Tags:

New Features Note:  This version of FlowJo is NOT compatible with FlowJo Enterprise. Stay tuned for the upcoming FlowJo Enterprise release that will work with this version. New FlowJo Plugin Architecture.   FlowJo can now use plugins that can perform a variety of functions, including the creation of populations, creation of derived parameters, and actions when… Read more »

tSNE

Tags:

T-Distributed Stochastic Neighbor Embedding (tSNE) is an algorithm for performing dimensionality reduction, allowing visualization of complex multi-dimensional data in fewer dimensions while still maintaining the structure of the data. tSNE is an unsupervised nonlinear dimensionality reduction algorithm useful for visualizing high dimensional flow or mass cytometry data sets in a dimension-reduced data space.  The tSNE platform computes two new… Read more »

Installing Plugins

Tags:

Plugins are executable java files that extend functionality of the FlowJo application. These can be installed and used as shown below. Installing Plugins in FlowJo v10: Create a folder named “plugins” on your computer. On a Windows computer this folder will already exist within the “FlowJo_v10.x” folder in the “Program Files”. On a Mac, it… Read more »

Plugins

Tags:

Plugins are apps that extend functionality of the FlowJo application.  Plugins are free add-ons, hosted on the FlowJo Exchange. A video demonstrating Plugin installation. FlowJo has an open API that allows us, or anyone else, to rapidly develop cutting edge tools without modifying the entire FlowJo application.  Please visit the Exchange to peruse the current… Read more »

10.1 Exhaustive Release Notes

Tags:

Below are the exhaustive release notes and known issues.  For a digest of these release notes, please see this page.   New Features: Performance: Background calculations are much less interruptive of user interaction. Boolean calculations and gate caching preference improves performance of of boolean gate calculations   UI Improvements: Updated icons across the application, optimization of bands… Read more »

10.1 Release Notes

Tags:

10.1 has many improvements to performance, platforms, and user experience.  You should notice a major improvement in interactivity and performance with deep gating trees and boolean gates, and we are indebeted to our loyal users whose feedback was critical in delivering this release.   New Features & Major Revisions: Jo file reading: Multiple improvements to .jo file reading including a fix… Read more »

Naming Timeslices

Tags:

Each kinetic analysis, or “node”, can contain multiple timeslices. Statistics will be reported for all of the events as well as for each time slice. The only control over timeslices are their placement, and their name. There are two ways to create time slices, either by clicking-dragging in the window, or by clicking one of… Read more »