SeqGeq is a standalone desktop application that allows you to explore your single-cell RNAseq data with an intuitive drag-and-drop interface. SeqGeq puts cutting-edge bioinformatics tools in your hands with a user-friendly interface that makes it easy to extract gene sets, produce publication-quality graphics, and analyze complex data rapidly. After sample preparation, sequencing, and primary data analysis to produce an expression matrix, SeqGeq gives you the powerful tertiary data analysis tools to iteratively explore your data in real time.


  • Flexible sample import
  • Powerful discovery tools
  • Explore and identify sub-populations of cells
  • Quickly identify differentially expressed genes
  • Import and visualize pathways as synthetic parameters
  • Real-time visualizations
  • Generate publication-ready figures with the touch of a button
  • Powerful reporting tools

More Info

For more about SeqGeq’s features and a list of known issues, see the detailed release notes. Click here to confirm the latest release.