The Stain Index plugin is a tool that allows researchers to quickly preform the Stain Index calculation on their data in FlowJo. The Stain Index calculation is a metric that quantifies the relative brightness of the stains used in a panel. The Stain Index value can be useful when designing panels and when analyzing titration… Read more »
PluginPlay Bundle
FlowJo PluginPlay Bundle This new PluginPlay Bundle contains some of our most popular R-based plugins and requires no separate installation of R on your computer, saving you time and letting you get straight to using these powerful tools in your analysis. The plugins in this bundle include FlowAI, FlowClean, FlowSOM, CytoNorm, IndexSort, and ViolinBox. Installation… Read more »
Dongle Troubleshooting
Basic Troubleshooting Finding Dongle ID (Newer Dongles – Black with cap – Delivered starting March 2023) Finding Dongle ID (Older Dongles – Red/Black Switchblade 2009-2023) Finding Dongle ID (Legacy Black Dongles <2009) Error Codes Error Message = Invalid dongle found with serial number %s An invalid dongle serial ID was used to create the license.key… Read more »
10.10 Release Notes
New Features: More Info For more about features and a list of known issues, see the exhaustive release notes.
Cluster Explorer
One of our most powerful plugins is now native in FlowJo v10.9 or later. Explore populations found through clustering tools using interactive plots displaying population frequencies, marker profiles, and populations overlaid on low-dimension maps. Brand new to v10.10 is the added ability to explore manually gated populations! All images can be copied to the clipboard… Read more »
MacOS10-12 Permissions (Catalina, Big Sur and Monterey)
Below are instructions for granting “Full Disk Access” to FlowJo on MacOS’s Catalina, Big Sur and Monterey for proper Dongle detection. Text-only Instructions:1. Open up your MacOS System Preferences and select Security & Privacy2. From the Security & Privacy window, select “Full Disk Access” and click the lock at the bottom left corner to unlock… Read more »
MacOS13 Permissions (Ventura and newer)
Below are instructions for granting “Full Disk Access” to FlowJo on MacOS’s Ventura and newer for proper Dongle detection. Please note that due to a change in MacOS, Dongles will not authenticate FlowJo 10.8.1 or older versions, on MacOS Ventura. We released an updated build, FlowJo v10.8.2, which addresses this issue and supports Dongle authentication on MacOS Ventura (v10.8.2 also… Read more »
Finding Dongle ID (Legacy Black Dongles <2009)
Dongle Serial ID Lookup Instructions Prior to 2009 is an older version of the all black capped dongle that allowed access to version 7/8. These are the instructions for legacy black Dongles delivered prior to 2009: Mac OS Text-only Instructions: 1. Click on Apple icon (top left of screen)2. Select About This Mac3. Click on… Read more »
Finding Dongle ID (Older Dongles – Red/Black Switchblade 2009-2023)
Dongle Serial ID Lookup Instructions Windows OS Instructions for older Dongles delivered prior to March 2023 Text-only Instructions: Full Instructions with Images: 5. Click the Hardware tab 6. Under All disk drives, select STT USB_JDTT USB Device 7. Press the Properties button on the bottom of the window 8. Click on the Details tab 9. In the Property dropdown, choose Device instance path 10…. Read more »
Finding Dongle ID (Newer Dongles – Black with cap – Delivered starting March 2023)
Dongle Serial ID Lookup Instructions Windows OS Instructions for newer Dongles delivered starting March 2023 Text-only Instructions: Full Instructions with Images: 5. Click the Hardware tab 6. Under All disk drives, select STT USB_JDTT USB Device 7. Press the Properties button on the bottom of the window 8. Click on the Details tab 9. In the Property dropdown, choose Device instance path 10. Copy… Read more »